WARNING: OPTION TABLES NEED UPDATING IN DOCUMENTATION
It is possible to set options in VECTRI, . This is done in the file vectri.options which you should save in the sub-directory input.
The parameters you may specify are given in the follow tables, which
associate parameters according to themes:
parameter | definition | default | units |
nyearspinup | length of spinup period discarded from output | 0 | years |
parameter | definition | default | units |
neggmn | eggs laid per female vector | 80 | |
nlayingmax | maximum number of vectors allow to lay (-ve no limit) | -99 | |
rlarv_tmax | maximum temperature for larvae survival | 35 | deg C |
rlarv_eggtime | time for egg hatching | 1.0 | days |
rlarv_pupaetime | time for pupae stage | 1.0 | days |
rlarv_flushmin | minimal daily survival L1 larvae after intense rainfall | 0.4 | |
rlarv_flushtau | exponential decay of flushing with rainrate | 50 | mm day |
rmasslarv_stage4 | mass of L4 larvae | 0.45 | mg |
biocapacity | larvae biomass carry capacity of pools | 300 | mg m |
rlarvsurv | base survival rate due to preditation | 0.825 |
parameter | definition | default | units |
neggmn | eggs laid per female vector | 80 | |
nlayingmax | maximum number of vectors allow to lay (-ve no limit) | -99 | |
rlarv_tmin | minimum temperature for larvae survival | 16 | deg C |
rlarv_tmax | maximum temperature for larvae survival | 37 | deg C |
rlarv_eggtime | time for egg hatching | 1.0 | days |
rlarv_pupaetime | time for pupae stage | 1.0 | days |
rlarv_flushmin | minimal daily survival L1 larvae after intense rainfall | 0.4 | |
rlarv_flushtau | exponential decay of flushing with rainrate | 50 | mm day |
rmasslarv_stage4 | mass of L4 larvae | 0.45 | mg |
biocapacity | larvae biomass carry capacity of pools | 300 | mg m |
rlarvsurv | base survival rate due to preditation | 0.825 |
parameter | paper | definition | default | units |
ipud_vers | puddle parametrization version (125/126/130) | 126 | ||
rwaterfrac_perm | permanent breeding site fraction | 10 | ||
rwaterfrac_max | maximum coverage by breeding sites | 0.04 | ||
rwaterfrac_rate | pond geometry factor | 10 | mm | |
rwaterfrac_evap126 | infiltration and evaporation rate loss of ponds | 250 | mm day | |
rwater_tempoffset | temperature offset of pond to air | 0 | deg C |
parameter | definition | default | units |
rnobednetuse | proportional of host NOT using bednet | 1 | |
rbednettreat (INOPERATIVE) | proportion of bednets insecticide treated | 0.0 |
parameter | definition | default | units |
rzoophilic_tau | e-folding population density for zoophilicity rate | 50 | m |
rzoophilic_min | minimum anthropophilic bite rate at low population densities | 0.1 | |
rbiteratio | bite rate success | 0.6 | per day |
parameter | definition | default | units |
rtgono | threshold temperature for egg development in vector | 7.7 | deg C |
dgono | degree days for egg development in vector | 37.1 | days |
rtsporo | threshold temperature for parasite development | 16.0 | deg C |
dsporo | degree days for for parasite development | 111 | days |
parameter | definition | default | units |
rpop_growth | population growth rate | 1.0 | ratio per year |
rpopdensity_min | minimum population density considered | 10 | m |
rmigration | simple migration fraction imported cases | 0.0 | year |
parameter | definition | default | units |
rtemperature_offset | temperature offset | 0.0 | deg C |
rtemperature_trend | temperature trend | 0.0 | deg C yr |
rrainfall_factor | ratio to scale rainfall by | 1.0 |