(*) Summary:
The mean intrinsic thermodynamic quantity can be defined by considering
the relative population of complex species in the solution and the
value of intrinsic thermodynamic quantity corresponds to each step of
ligation. In the present study, a new approach was introduced for
analysis of experimental ligand binding data on basis of mean intrinsic
thermodynamic quantities. In this regard, a deviation parameter was
defined by comparing the non-interacting system with the cooperative
interactive one. This parameter can be calculated just by estimation of
the first binding constant. A set of relations between this deviation
parameter and other binding characteristics, such as mean intrinsic
Gibbs free energy of binding
and mean Gibbs free energy of site–site
interaction, have been developed. This model presents binding mechanism
in a unified way that is simple,yet stringent, more straightforward,
more reliable and informative. This analyzing method has been
successfully applied for evaluation of various systems such as oxygen
binding to hemoglobin, laurate and warfarin binding to human serum
albumin, and reveals some new biological features of these binding
systems.
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(**) Biodata: Professor Abdol-khalegh Bordbar
graduated in Biophysical Chemistry at the University of
Tarbiat-Modarres with a distinguished degree in 1997. After graduating,
he has worked as an Assistant Professor at the Department of Chemistry,
University of Isfahan, Isfahan, Iran.
Since 2007 he is Professor at
this university. He was distinguished researcher in Isfahan university
in 2007. He has published more than 60 international papers in the area
of Biophysical Chemistry and supervised many MSc and PhD students. His
main interests are related to interaction of ligands to
biomacromolecules, structure-function relationship in biological
systems, protein stability and interaction of anticancer drugs with
transport proteins and DNA.