In: Evolutionary and Molecular Biology: Scientific Perspectives on Divine Action. R. J. Russell, W. R. Stoeger and F. J. Ayala, Editors. Vatican City State/Berkeley, California: Vatican Observatory and the Center for Theology and the Natural Sciences, pp. 79-99.
THE PHENOMENON OF THE EUKARYOTIC CELL
Julian Chela-Flores
International Centre for Theoretical Physics,
Miramare P.O. Box 586; 34100 Trieste, Italy and
Instituto Internacional de
Estudios Avanzados,
(Universidad Simon Bolivar)
Apartado 17606 Parque Central,
Caracas 1015A,Venezuela
Abstract. In the context of cosmic evolution we present a brief discussion of the appearance of the first steps in evolution that led to intelligent life on Earth. Special attention is given to chemical and biological evolution. We emphasize the hypothesis that provided the planets of a given solar system have the appropriate volatiles (particularly water and oxygen), not only life, but eukaryogenesis (i.e., the appearance of nucleated cells) is bound to occur. Further, this conjecture has the merit that it is subject to experimental verification. In fact, the question of the possible existence and degree of biological evolution of microorganisms in the Solar System has been raised in the past, in spite of the negative results of the Viking Missions. In the special case of Mars the possible occurrence of eukaryotes during an earlier epoch was raised prior to the announcement of some preliminary evidence for prokaryotic life on Mars, a question that has not been settled yet. We maintain that there is a second environment in our own Solar System, the Jovian satellite Europa, in which the hypothesis of the ubiquity of eukaryogenesis may be tested in the foreseeable future. We discuss this possibility in some detail and mention a specific mission that, if approved, could in principle test the degree of evolution of the putative Europan biota.
1. From cosmic evolution to chemical evolution
1.1. INTRODUCTION
Long before the advent of science
and philosophy, theologians were raising questions that we still
cannot answer fully. Some of the deepest questions that have persistently
remained with us since biblical times are: What is the origin
of the universe? What is it made of? What is its ultimate destiny?
How did life in general, and humans in particular, originate?
Are we alone in the cosmos? The first philosophical attempts to
answer these questions were made a few centuries before our own
era by the ancient Greeks, notably by Thales of Miletus (who was
active during the time of the Prophet Jeremiah and the destruction
of Jerusalem in 587 B.C., which had been founded by King David
almost half a millennium earlier). A significant contribution
to the birth of science was made by another ancient Greek, Democritus
of Abdera, one of the founders of atomism (who was active during
the time of Ezra's reform, which, by the promulgation of the by-then-ancient
Mosaic Law in 430 B.C., gave Judaism its distinctive character).
I feel that there is no better way to organize the information
available to scientists, than to reconsider those questions as
originally set in the antiquity, in order to appreciate, in an
orderly manner, the considerable progress that has been achieved
up to the present in our understanding of cosmological models
and the appearance of intelligent life on Earth. In spite of the
impressive progress of science, many fundamental questions remain
unanswered.Therefore, before beginning our task it may be prudent
to recall that Cosmology suggests that there is sufficient time
available for science to progress to a stage in which further,
and possibly better attempts that are now possible, will be made
in order to search for answers of some of the deepest questions
(mentioned above) which humans have been asking themselves from
time immemorial.
Up to the present partial answers have often led to controversy
between scientists, philosophers and theologians. We should be
constantly aware of the limited scope of scientific method, a
point that has been stressed by Bertrand Russell. Recognising
a limit to the applicability of present day science, he expressed
that:
almost all the questions of most interest to speculative minds are such as science cannot answer 43.
1.2. COSMOLOGICAL MODELS
Our first topic is suggested by
the Book of Genesis ("In the beginning God created the
heavens and the earth" : 1, 1). To approach
this problem from the point of view of science, a preliminary
step is to grasp the significance of the scale of time involved.
For this purpose we must return to the first instants of cosmic
expansion. Our sketch must be brief, as we already have available
the previous review of Coyne at the 4th Trieste Conference14.
The American scientist Edwin Hubble discovered in 1929 that the
velocity of recession of a certain galaxy under observation is
proportional to its distance. This phenomenon is normally expressed
in megaparsecs. The constant of proportionality, which is known
as the Hubble constant Ho is, consequently, given by the ratio
of the speed of recession of the galaxy and its distance; Ho represents
quantitatively the current rate of expansion of the universe.
The measurements of Ho 25 at present lie, in one case (Mould
and Freedman) in the range of 55-61 km s -1 Mpc -1 and, in a
second case (Sandage, Tammann, and Saha) Ho lies in the range
of 68 to 100 km s -1 Mpc -1 . These results, and other current
values, agree with a value of Ho in the range 65-82 km s -1 Mpc
-1 (1 pc = 3.26 light years; 1 Mpc = 106 pc).
The implication of, for instance, Ho = 70 km s -1 Mpc -1 in
the standard cosmological model (cf., the Friedmann model below)
of an expanding universe implies an age of 9-14 thousand million
years (Gyr), depending on the particular assumption we may adopt
for the matter density present in the universe. Unfortunately,
this state of affairs raises some difficulties, as there are galactic
globular clusters whose age is estimated to be 13-17 Gyr (cf.,
ref. 24 for references). On the other hand, life on Earth extends
back to some 4 Gyr before the present (BP); therefore, the chemical
evolution scenario faces no particular difficulties with the above
values of Ho .
The classical cosmological solution assumes isotropy and homogeneity
in the equations of the theory of gravitation of Albert Einstein,
known as General Relativity (GR) 2. Cosmological models may be
discussed in terms of a single function R of time t. This function
may be referred to, quite appropriately, as a 'scale factor'
or, sometimes in reference to the particular solution of the GR
field equations in a geometric background, the expression 'radius
of the universe' may be preferred for the function R. As the universal
expansion sets in, R is found to increase in a model that assumes
homogeneity in the distribution of matter (the 'substratum'),
as well as isotropy of space.
The functional dependence of R, as a function of time t is a
smooth increasing function for a specific choice of two free
parameters which have a deep meaning in the GR theory of gravitation,
namely, the curvature of space and the cosmological constant.
The functional behaviour of the scale factor R was found by the
Russian mathematician Alexander Friedmann in 1922. This solution
is also attri
buted to Howard Percy Robertson and A.G. Walker for their work
done in the 1930s. Such a (standard) model is referred to as
the Friedmann model.
In fact, R is inversely proportional to the substratum temperature
T. Hence, since R is also found to increase with time t (cf.,
the previous paragraph), T decreases; this model implies, therefore,
that as t tends to zero (the 'zero' of time) the value of the
temperature T is large. (The temperature goes to infinity as T
tends to zero.) In other words, the Friedmann solution suggests
that there was a 'hot' initial condition.
As the function R represents a scale of the universe (in the sense
we have just explained), the expression 'Big Bang', due to Sir
Fred Hoyle, has been adopted for the Friedmann model. The almost
universal acceptance of Big-Bang cosmology is due to its experimental
support. As time t increases the universe cools down to a certain
temperature, which at present is close to 3 K. The work performed
during the 1960s by the engineers of the Bell Telephone Company
Arno Penzias and Robert Wilson was rewarded with a Nobel Prize
in Physics in 1978. They provided solid evidence for the "T
= 3 K" radiation, which may be confidently considered to
be a relic from the Big Bang.
Andre Linde envisions a vast Cosmos in a model in which the current
universal expansion is a bubble in an infinitely old 'superuniverse'.
In other words, in this model the universe is assumed to be a
bubble amongst bubbles, which are eternally appearing and breading
new universes. The scale parameter R evolves as a function of
time t in such a cosmology, but as in the earlier model of Alan
Guth, the Linde model differs from the Friedmann solution in the
first instants of cosmic evolution. A word of warning, depending
on the way the word "standard" is used, both the Linde
and Guth models can be considered standard Big Bang models. Indeed,
Guth proposed the original inflationary model which solved many
of the problems inherent of the preliminary Big Bang models. In
fact, the inflationary universe, as we are realizing, is a class
of Big Bang models that incorporates a finite period of accelerated
expansion during its early development. The inflation process
releases a large amount of energy retrieved from the vacuum of
spacetime. It should be pointed out that Linde also assumed inflation.
1.3. THE BIRTH OF THE STUDIES OF THE ORIGIN OF LIFE.
Science today aims at inserting
biological evolution in the context of cosmic evolution. We will
mainly attempt to convey the idea of an ongoing transformation
in origin of life studies. This progress in understanding our
own origins began about three decades ago, triggered by the success
in retrieving some key biomolecules in experiments which attempted
to simulate prebiotic conditions. Some of the main experiments
of the 1950s and early 60s were done by organic chemists including
Melvin Calvin, Stanley Miller, Sidney Fox, Juan Oro, Cyril Ponnamperuma
and their co-workers.
These efforts have led to view the Cosmos as a matrix in which
organic matter can be inexhorably self-organized by the laws of
physics and chemistry into what we recognise as living organisms.
However, in this context it should be stressed that chemical evolution
experiments have been unable to reproduce the complete pathway
from inanimate to living matter. In particular, the prebiotic
synthesis of all the RNA bases is not clear and cytosine, for
instance, may not be prebiotic and it may even have been imported
from space . This aspect of chemical evolution has been repeatedly
pointed out by Robert Shapiro 53. Thus, at present the physical
and chemical bases of life that we have sketched remain a strong
possibility, but further research is still needed.
Originally the subject began to take shape as a scientific discipline
in the early 1920s 38, when an organist chemist, Alexander Oparin
applied the scientific method of conjecture and experiments to
the origin of the first cell 40, thereby allowing scientific enquiry
to shed valuable new light on a subject that has traditionally
been the focus of philosophy and theology.
1.4. THE GROWTH OF THE STUDIES OF THE ORIGIN OF LIFE.
The still ongoing second large
step in the development of origin of life studies consists of
taking the subject from the laboratories of the 'card-carrying'
organist chemists, where Oparin had introduced it, into the domain
of the life, earth and space scientists. In fact, the subjects
of Exobiology and Bioastronomy have come of age due to the space
missions of the last 30 years (Mariner, Apollo, Viking and particularly
the most recent one, Galileo, which is currently sending valuable
information on the Jovian system). Many further missions are being
planned for the rest of this decade, and the beginning of the
next century
New areas of research have come into existence as a consequence
of this change of emphasis, such as planetary protection,
whose aim is to prepare ourselves in advance for the retrieval
of samples from Mars and Europa in the missions that may be scheduled,
in the case of Mars, as early as the year 2003.
The experiments and sample retrieval from Europa are in the process
of discussion. Indeed, a NASA and National Science Foundation
(NSF) meeting to discuss such matters was organized in 1996 (Europa
Ocean Conference, San Juan Institute, San Juan Capistrano,
California). Planetary Protection has been pioneered by Donald
DeVincenzi at NASA-Ames, John Rummel at the Marine Biological
Laboratory and Margaret Race at the SETI Institute.
A second discipline that has arisen from the exploration of the
Solar System is comparative planetology 33, which is needed
in the formulation and development of devices which in principle
may allow the search for Solar System relics of the earliest stages
of the evolution of life.
The problem of the search for extraterrestrial life may be approached
in order of increasing complexity: Alexandra MacDermott, from
the University of Cambridge, has led in the search for extraterrestrial
homochirality, SETH. (Homochirality refers to single-handedness
observed in the main biomolecules, namely, amino acids, nucleic
acids and phospholipids.) Secondly, we have argued in favour of
the search for extraterrestrial single-celled organisms of a
nucleated type. (For a discussion of several types of microorganisms
we refer the reader to Sec. 2.3 below, in which the word of Greek
origin 'eukaryote' shall be assigned to such nucleated cells.
The search for such organisms shall be abbreviated as SETE, the
search for extraterrestrial eukaryotes. )
Finally, at the other extreme, we have the search for extraterrestrial
intelligence (SETI), a time-honoured subject that was pioneered
by Frank Drake in the early 1960s 13, 14. The eventual success
of SETI may depend on the adoption of truly significant enterprises,
such as the extension of SETI to the far side of the Moon in the
100 km diameter crater Saha, as advocated by Jean Heidmann from
the Observatory of Paris and Claudio Maccone from the G. Colombo
Center for Astrodynamics in Turin. None of the extremely ambitious
engeneering projects underlying this proposal seem beyond present
technological capabilities, such as the construction of a 340
km road linking laboratories in Mare Smythii (at the equatorial
level and at the Moon's limb) and crater Saha (103 o E, 2o S)
19. In fact, the only limitation forseen is the will of our society
to maintain continued progress by providing adequate budgets to
scientists and engineers involved in the main programmes of Bioastronomy
and Exobiology during the coming decade.
To continue the overview of the origin of life studies, we must
first return to cosmological models.
1.5. THE ORIGIN OF THE ELEMENTS
In less than one million years
after the beginning of the general expansion, the temperature
T was already sufficiently low for electrons and protons to be
able to form hydrogen atoms. Up to that moment these elementary
particles were too energetic to allow atoms to be formed. Once
'recombination' of electrons and protons was possible, due to
falling temperatures, thermal motion was no longer able to prevent
the coulomb interaction from forming atoms. This is the 'moment
of decoupling' of matter and radiation.
Gravity itself has induced the coalesced nuclei of stars to initiate
thermonuclear reactions that created all the heavier elements.
At the supernova stage these elements are expelled for later new
cycles of condensation into stars and planets. The Earth arose
in this manner some 4.6 Gyr BP.
It is well known that stars evolve as nuclear reactions convert
mass to energy. In fact, stars such as our Sun follow a well known
pathway (the main sequence) along a Hertzprung-Russell
(HR) diagram, which was introduced independently by Ejnar Hertzprung
and Henry Russell in the early part of this century. Many nearby
stars exhibit a certain regularity (such stars are called main
sequence stars) when we plot luminosity (the total energy
of visual light radiated by the star per second) versus its surface
temperature or, alternatively, its spectroscopic type. We may
ask, how do stars move on the HR plot as hydrogen is burnt? Extensive
calculations show that main sequence stars are funnelled into
the upper right hand of the HR diagram, where we find stars of
radii that may be 10 to 100 times the Sun radius. Such giant
stars are characterized by high luminosity and red colour,
and hence are called 'red giants'.
It is instructive to consider a sample of stars, emphasizing some
that are now known to be much more similar to our own Solar System
27, as they have Jupiter-like planets; such a property militates
in favour of life having been provided a variety of favourable
environments in our own galaxy
Stellar evolution puts a significant constraint on the future
of life on Earth, since the radius of the Earth orbit is small
(its eccentricity may be neglected), and the radius of the Sun
is bound to increase as it evolves along the main sequence in
the HR diagram, thus eventually ending life on Earth. The current
estimate is that in another 4-5 Gyr life may continue on Earth
before the Earth's orbit is no longer in a habitable zone. However,
the implication of such duration of geologic time is indeed profound
for our species, as we shall suggest in the next section.
1.6. IMPLICATIONS OF STELLAR AND BIOLOGICAL EVOLUTION
Homo sapiens has evolved, according to the standard
view of paleoanthropology, in less than a few million years since
the last common ancestor of the hominids, who must have lived
at the Miocene/Pliocene transition, just some 5 million years
before the present (Myr BP). Such fast evolutionary tempo has
been effective only within a small fraction of 1% of the geologic
time that is still available for natural selection to continue
the process of evolution of all living species, including H.
sapiens. (Such time is measured in billions of years).
Science is at present unable to anticipate the future of H.
sapiens; but this has not deterred fiction writers to envisage
a model for a future speciation event into the imaginary eloi
and morlock species of the Homo genus
57.
What is clear at present, from a combined consideration of
cosmic, stellar, biological and cultural evolution, is that the
contemporary stage of human development will inevitably continue
to evolve. This is due to the mechanism of natural selection,
which is expected to continue for at least four billion years
to play its role on all living organisms on Earth. (Once again,
this would be true as long as the Earth remains within the habitable
zone of the Solar System.)
Although the human brain is considerably larger than that of the
great apes, it will still be subject to evolutionary pressures
for over a thousand times as long as the period in which natural
selection rose the primitive brain of the earliest hominids (the
australopithecines, who lived in the Lower Pliocene Epoch) with
cranial capacity from under 400 cc, to over 300% of that capacity
in the most evolved early humans of the Pleistocene. This broad
scenario for the possible future effects of natural selection
on the Homo genus gives us an optimistic outlook on the
future of life on Earth.
2. From chemical evolution to the origin of the single cells
2.1. CHEMICAL EVOLUTION IN THE COSMOS
Given the importance of the origin
and evolution of the biomolecules, we feel that it is appropriate
to begin with comments on the origin of some of the most important
biomolecules. We have to recall that there has been considerable
progress in our understanding of the interstellar organic molecules.
There are also many indications that the origin of life on Earth
may not exclude a strong component of extraterrestrial inventories
of the precursor molecules that gave rise to the major biomolecules.
About 98% of all matter in the universe is made of hydrogen and
helium. The other five biogenic elements C, N, O, S and P make
up about 1% of the cosmic matter. The abundance of biogenic elements
would suggest that the major part of the molecules in the universe
would be organic (i.e., such molecules would be compounds of carbon
atoms); in fact, out of over a hundred molecules that have been
detected, either by microwave or infrared spectroscopy, 75% are
organic 35.
Once again, we should underline that chemical evolution experiments
fare well in comparison with the observation of the interstellar
medium. Some of the identified molecular species detected by means
of radioastronomy are precisely the same as those shown in the
laboratory to be precursor biomolecules.
2.2. FROM 'PRECURSOR-BIOMOLECULES' TO BIOMOLECULES
In our studies of the orgin of life we may encounter the major biomolecules: amino acids, nucleic acids, polysaccharides and lipids. Altogether, about 12 interstellar molecules have been shown to be precursors of the main biomolecules. Our insights into the origin of life are based on the formation of compounds of H, N, O and P. The evolution of organic compounds in the interstellar medium has been exhaustively studied. Interstellar gas and dust, ices and grains are the precursors of the Solar System, after a primordial condensation process. Biomolecular precursors have been detected in the interstelllar medium, such as molecular hydrogen, water (the dominant ice component in dense clouds), and carbon monoxide, amongst others. Research in the field of what has been called 'cosmochemistry' began in the 1950s and extends right into the present, but will undoubtedly continue its robust progress in the future. Comprehensive reviews are given in the Trieste Series on Chemical Evolution 39, 40, 6, 7.
2.3. MODERN TAXONOMY AND TERMINOLOGY OF SINGLE-CELLED ORGANISMS
The focus of our attention in
what follows will be a group of microorganisms that are either
single-celled, or multicellular; their genetic material is enclosed
inside a membrane different from the cell membrane. For this reason
they are called eu-karyotes, from the Greek words 'karyons'
(which means nucleus) and 'eu' (which means
true).
Taxonomically the totality of such organisms is said to form the
domain Eukarya, which contains kingdoms, such as the well-known
Kingdom Animalia. (The most recent taxon introduced in the scientific
literature at the highest level is called a 'domain'.)
On the other hand, there are unicellular organisms referred to
as 'prokaryotes' that, as their name implies, normally lack a
nuclear membrane around their genetic material. Generally they
are smaller than eukaryotes. Well known examples are bacteria.
However, not all prokaryotes are bacteria! There is a whole domain
that encompasses a group of single-celled organisms which are
neither bacteria nor eukaryotes. They are generally referred to
as archaebacteria 21. In other words, all prokaryotes
are encompassed in two domains: Bacteria and Archaea. They may
be adapted to extreme conditions of temperature (up to just over
100 ° C), in which case they may be called thermophiles.
They may also be adapted to extreme acidic conditions, in
which case they may be referred to as being acidophilic.
The alternative expressions of extremophiles, or hyperthermophiles
are sometimes used for these organisms to distinguish different
degrees of adaptability to such extreme ranges of conditions.
As we said above, all archaebacteria are said to form the third
domain of life, namely the domain Archaea, which is divided into
several kingdoms.
2.4. EVOLUTION OF PROKARYOTIC CELLS IN THE PRECAMBRIAN
The main steps of chemical evolution
on Earth should have taken place from 4.6 - 3.9 Gyr BP, the preliminary
interval of geologic time which is known as the Hadean Subera.
It should be noticed, however, that impacts by large asteroids
in the early Earth do not necessarily exclude the possibility
that the period of chemical evolution may have been considerably
shorter. Indeed, it should not be ruled out that the Earth may
have been continuously habitable by non-photosynthetic ecosystems
from a very remote date, namely since approximately 4.44 Gyr BP54.
The content and the ratios of the two long-lived isotopes of reduced
organic carbon in some of the earliest sediments (retrieved from
the Isua peninsula, Greenland, some 3.8 Gyr BP), may convey a
signal of biological carbon fixation44 This reinforces the expectation
that chemical evolution may have occurred in a brief fraction
of the Hadean Subera, in spite of the considerable destructive
potential of large asteroid impacts which took place during during
the same geologic interval in all the terrestrial planets, the
so-called heavy bombardment period.
An early date for the origin of life may be considered by
interpreting the molecular analysis of ribosomal RNA (rRNA) in
a variety of organisms in terms of the molecular clock hypothesis
16. This work in molecular biology suggests that life emerged
early in Earth's history, even before the end of the heavy bombardment
period. In those remote times life may have already colonized
extreme habitats, which allowed at least two prokaryotic species
to survive the large impacts that were capable of nearly boiling
over an ocean. In subsequent suberas of the Archean (3.9 - 2.5
Gyr BP) life, as we know it, was present. This is well represented
by fossils of the domain Bacteria, which is well documented by
many species of cyanobacteria 46.
To sum up, we may not exclude from the geochemical data earlier
dates, in the Lower Archean, for the first prokaryotic microflora,
although some critical considerations from the point of view of
geochronology still do not rule out the possible origin of life
immediately after the end of the Hadean Subera 32. However, the
earliest prokaryotic fossils that have not been subjected to regional
metamorphism are those dating back to 3.5 Gyr BP 45. Eukaryotes
- nucleated cells - arose in the next eon, which is called the
Proterozoic (2.5 - 0.6 Gyr BP). This eon saw the progression from
a largely anoxic atmosphere to a weakly oxic one about 2 Gyr BP.
The increment of atmospheric oxygen was a key geophysical factor
which allowed the formation of the eukaryotic cells.
3. From the age of the prokaryotes to eukaryogenesis
3.1. ROLE OF O2 AND Fe IN THE FIRST APPEARANCE OF EUKARYOTES (EUKARYOGENESIS)
Several lines of research suggest
the absence of current values of O2 for a major part of the Earth
history. There are some arguments, nevertheless, that militate
in favour of Archean atmospheres with values of the partial pressure
of atmospheric oxygen O2 about 10-12 of present atmospheric level
(PAL).
Shale is a rock that has played a role in our understanding of
biological evolution. Shale is mainly clay that has hardened into
rock. The onset of atmospheric oxygen is demonstrated by the presence
in the geologic record of red shale coloured by ferric oxide.
The age of such 'red beds' is estimated to be about 2 Gyr At
that time oxygen levels may have reached 1-2% PAL, sufficient
for the development of a moderate ozone protection for the microorganisms
of the Proterozoic from ultraviolet (UV) radiation. In fact,
UV radiation is able to split the O2 molecule into the unstable
O-atom, which, in turn, reacts with O2 to produce ozone O3, which
is known to be an efficient filter for the UV radiation.
The paleontological record suggests that the origin of the eukaryotic
cell occurred earlier than 1.5 Gyr BP. Some algae may even date
from 2.1 Gyr BP 18, a period comparable to the first onset of
red beds. This is still rather late, compared to the earliest
available prokaryotic fossils of some 3.5 Gyr BP 46.
However, if we keep in mind certain affinities between eukaryotes
and archaebacteria (such as homologous factors in protein synthesis),
we may argue that archaebacteria and the stem group of eukaryotes
may have diverged at about the same time 42. This conjecture,
combined with the lightest carbon isotope ratios from organic
matter, imply that bacteria capable of oxidizing methane CH4 ('methylotrops')
may have been using methane produced by archaebacteria that were
able to produce it as a byproduct of their metabolism. From the
age of such fossils a tentative date of 2.7 Gyr BP, or earlier,
may even be assigned to eukaryogenesis.
There are Archean rock formations (which may be found up to 2
Gyr BP) that are significant in the evolution of life. These are
laminated compounds of dioxide of silicon (silica) and iron. In
reference to their laminated structure they are called "banded
iron formations" (BIFs).
The period in which the BIFs were laid out ended some 1.8 Gyr
BP. In the anoxic atmosphere of the Archean, iron compounds could
have been dispersed over the continental crust. They could have
absorbed some oxygen, thereby protecting photosynthesizers that
could not tolerate oxygen. Such microorganisms in turn produced
oxygen that combined with their environment to produce iron oxide
(for example, hematite Fe2O3), which makes up the BIFs.
In strata dating prior to 2.3 Gyr BP it has been observed that
there is an abundance of the easily oxidized mineral form of
uranium (IV) oxide (urininite, for example the well-known variety
pitchblende). This supports the conclusion that we had
to wait until about 2 Gyr BP for a substantial presence of free
O2. Once the eukaryotes enter the fossil record, its organization
into multicellular organisms followed in a relatively short period
(in a geological time scale).
Metazoans are hypothesized to have arisen as part of a major eukaryotic
radiation in the Riphean Period of the of the Late Proterozoic,
approximately 800-1,000 Myr BP 24, when the level of atmospheric
O2 had reached 4-8% PAL. There is some evidence in the Late Proterozoic
during the Vendian Period, for the existence of early diploblastic
grades (Ediacaran faunas): These organisms were early metazoans
with two germ layers, such as the modern coelenterates (jellyfishes,
corals, and sea anemones).
Later on, when the level of atmospheric O2 had reached values
in excess of 10% PAL, these grades were overtaken in numbers by
triploblastic phyla as the level of atmospheric O2had reached
40% PAL. These organisms are called the Cambrian faunas, i.e.,
Early Paleozoic faunas, some 500 million years before the present
(Myr BP), which were mainly metazoans with three germ layers).
They constitute at present the greater majority of multicellular
organisms, including H. sapiens.
We may obtain further insights from paleontology: acceleration
in the evolutionary tempo is observed after the onset of eukaryogenesis,
as it is clearly demonstrated by the microfossils of algae from
the Late Proterozoic 25 and by the macrofossils of the Early Phanerozoic
(Cambrian Period of the Paleozoic Era) 8. Such evolutionary changes
within the first billion years of atmospheric oxygen rose the
simple prokaryotes to eukaryotes, metazoans and metaphytes.
3.2. IDENTIFICATION OF EUKARYOTES WHOSE MORPHOLOGY IS NOT RADICALLY DIFFERENT FROM PROKARYOTES
Primitive eukaryotic organisms have been studied in detail and many difficulties are inherent in the eventual design of an assay to identify them in an extraterrestrial environment, a question which begins to be important in view of the forthcoming space missions In the present paragraph we discuss some properties of the organisms, either alive or fossilized, that may be difficult to distinguish in a robotic mission:
o One such taxon is the family Cyanidiophyceae. These organisms are rhodophytes, commonly known as red algae49. Joseph Seckbach from the Hebrew University of Jerusalem has argued eloquently that these acido-thermophilic algae may constitute a bridge between cyanobacteria and red algae50. In particular, Cyanidium caldarium has a primitive eukaryotic cellular structure. Other remarkable properties of C. caldarium is that it may live at temperatures of up to 57 oC and shows better rates of growth and photosynthesis when cultured in an 'atmosphere' of pure CO2 48.
o Silicification experiments of microorganisms have led to the identification of one artefact, which can cause confusion in the identification of the transition organisms 58. Frances Westall and co-workers at the University of Bologna have observed an artificial nucleus formed during the process of fossilization. If such a phenomenon is preserved in the natural fossil record, then it can lead to a confusion with the eukaryotes.
o Prokaryotic symbionts of the ciliated protozoan Euplotidium itoi has ultrastructure which is more complicated than the majority of prokaryotes 41. Strictly from the point of view of planning future SETE experiments, the most striking feature discovered by Giovanna Rosati and co-workers at the University of Pisa is the presence of 'basket tubules', consisting of the protein tubulin, which is normally present only in eukaryotes.
4. From eukaryogenesis to the appearance of intelligent life on Earth
4.1. MODERN TAXONOMY EMPHASIZES SINGLE-CELLED ORGANISMS
In evolutionary terms, we choose
not to emphasize complex multicellular organisms. Instead, we
have shifted our attention to the single-celled nucleated organism
(eukaryote), whose evolution is known to have has led to intelligence,
at least on planet Earth. This point of view is forced upon us
by the present taxonomical classification of organisms into domains,
which stresses single-celled organisms. Previously, an older taxonomical
classification in terms of kingdoms as the highest taxon highlighted
multicellular organisms, incorrectly in our view.
The older approach was due to biologists lacking an understanding
of molecular biology, which only made its first appearance in
the early 1950s. Biology has been able to provide us with sufficient
insights into the cell constituents to permit the wide acceptance
of a comprehensive taxonomy, which places Bacteria, Archea and
Eukarya as the highest groups (taxa) of organisms. We can paraphrase
Sir Julian Huxley's comments in the introduction of "The
Phenomenon of Man" 55, by remarking that there
is an evident inexhorable increase towards greater complexity
in the transition from Bacteria to Eukarya.
To borrow the phrase of Christian De Duve11, we may say that
the laws of Physics and Chemistry imply an 'imperative' appearance
of life during cosmic evolution, a view which is not in contradiction
with the relevant remarks of Sir Peter Medawar in his comment
on Père Teilhard's work 30.
4.2 THE PHENOMENON OF THE EUKARYOTIC CELL
We are going one step beyond De
Duve. We defend the hypothesis that not only life is a natural
consequence of the laws of Physics and Chemistry, but once the
living process has started, then the cellular plans, or blueprints,
are also of universal validity: the lowest cellular blueprint
(prokaryotic) will lead to the more complex cellular blueprint
(eukaryotic). This is a testable hypothesis. Within a decade
or two a new generation of space missions may be operational.
Some are currently in their planning stages, such as the hydrobot/cryobot,
which is aiming to reach the Jovian satellite Europa in the second
decade of next century 56, 20. We shall present the rationalisation
behind this effort in Sec. 6 below.
Closely related to the above hypothesis (the proposed universality
of eukaryogenesis), concerns the different positions which are
possible regarding the question of extraterrestrial life:
Is it reasonable to search for Earth-like organisms, such as a eukaryote, or should we be looking for something totally different?
We will discuss in turn tsome
of the arguments involved. Firstly, the more widely accepted belief
on the nature of the origin of life is that life evolved according
to the principles of deterministic chaos. Evolutionary developments
of this type never run again through the same path of events 23.
Secondly, the possibility for similar evolutionary pathways on
different planets of the solar system has been defended recently
10. Indeed, even if some authors may consider this to be a remote
possibility, Davies bases his work on the increasing acceptance
that catastrophic impacts have played an important role in shaping
the history of terrestrial life. Thus there may be some common
evolutionary pathways between the microorganisms on earth and
those that may have developed on Mars during its 'clement period'
(roughly equivalent to the early Archean in earth stratigraphy).
The means of transport may have been the displacement of substantial
quantities of planetary surface due to large asteroid impacts
on Mars.
Finally, even in spite of the second possibility raised above,
many researchers still see no reason to assume that the development
of extraterrestrial life forms followed the same evolutionary
pathway to eukaryotic cells, as it is known to have occurred on
earth. Moreover, a widespread point of view is that it would seem
reasonable to assume that our ignorance concerning the origin
of terrestrial life does not justify the assumption that any extraterrestrial
life form has to be based on just the same genetic principles
that are known to us.
In sharp contrast to the position denying that of common genetic
principles may underlie the outcome of the origin of life elsewhere,
De Duve has pointed out 11 a fourth point of view in the discussion
of the various possible ways of approaching the question of the
nature of extraterrestrial life. We may conclude that we all agree
that the final outcome of life evolving in a different environment
would not be the same as the earth biota. But De Duve has broken
new ground when he raised the question as to how different would
be the outcome of the origin of life elsewhere? This has led
to a clear distinction that there is no reason for the details
of the phylogenetic tree to be reproduced elsewhere (except for
the possibility of biogenic exchange in the Solar System discussed
above 10 ). The tree of life constituted by the earth biota may
be unique to planet earth.
On the other hand, there is plenty of room for the development
of differently shaped evolutionary trees in an extraterrestrial
environment, where life may have taken hold. But
"certain directions may carry such decisive selective advantages as to have a high probability of occurring elsewhere as well" 11.
4.3. THE PHENOMENON OF MULTICELLULARITY
The current view on terrestrial
evolution spanning from the first appearance of the eukaryotic
cell to the evolution of metazoan organisms is as follows:
In the Proterozoic Eon, a geologic period which extends from
2.5 to 0.545 Gyr BP, we come to the end of the Precambrian that
had seen the first appearance of the eukaryotic cell. The Proterozoic
was followed by the most recent eon, that has seen the spread
of multicellular organisms throughout the Earth on its oceans
and continents, the Phanerozoic, which extends from the end of
the Proterozoic to the present. We should comment on some aspects
of the current Phanerozoic:
o Intelligence as we understand it, had to await the Quaternary
Era, when the first traces of intelligence arose in our ancestors.
A more evident demonstration of the appearance of intelligent
life on Earth than the habilines' tools, or the ceremonial burials
had to wait till the Magdalenian 'culture' (in the archaeologic
classification of southwestern Europe and north Africa this group
of human beings flourished from about 20,000 to 11,000 years before
the present (yr BP). The Magdalenians left some fine works of
primitive art as, for instance the 20,000 year old paintings on
the walls of the cave discovered in December 1994 by Jean-Marie
Chauvet in southeastern France. Indeed, the birth of art in the
Magdalenians' caves, is one of the most striking additions to
the output of humans that entitle us to refer to the groups that
produced these fine works, as cultures, rather than industries,
a term which is reserved to the group of humans that produced
characteristic tools, rather than works of art.
The purpose of this sketch has been to bring into focus the different
branches of science, including the social sciences, which have
contributed to stitch together a huge canvas depicting a great
deal of knowledge that has been put together to provide partial
answers to the very questions that humans have recorded since
the most ancient times, particularly the the Israelites over two
thousand years ago when the Old Testament of the Bible was written
down. Those disciplines include anthropology, paleontology, prehistoric
research, geochronology, biogeology and geochemistry, amongst
others.
5. Extraterrestrial sources for life's origin: the evidence from two meteorites
5.1. THE CASE FOR A SETE PROGRAM
The problem of eukaryogenesis
occupies a central position in a wide range of problems which
concern the origin, evolution and distribution of life in the
universe, ranging from chemical evolution to "exobiology"
. A program for the search for extraterrestrial eukaryotes (SETE)
is relevant to SETI, as the only form of intelligent life that
we are familiar with is based on multicellular organisms of eukaryotic
cells (Domain Eukarya). Rather than the empirical SETI approach,
exploring the consequences of the laws of physics and chemistry
may give us some insights on the question whether or not we are
alone in the Cosmos. This has been attempted by De Duve 11: This
concept of the constraint on chance militates against the older
criterium of Monod 31 who, during his lifetime, had less information
than we have accumulated now on the mechanisms that are behind
the origin and evolution of life on Earth.
Indeed, chance (rate of mutations) and necessity (natural selection)
do not imply that life elsewhere in the cosmos is unlikely. Thus,
the prospect for detecting life in the newly discovered planets
remains a possibility by detecting life-supporting volatiles,
as strongly advocated in the past by Christopher McKay. The rationale
behind this approach to the search of life is that we now know
that a substantial fraction of the volatiles on Earth were deposited
by the infall of comets in the past. It seems plausible that such
a phenomenon may not have been restricted just to the planet Earth.
We should add that many researchers now feel that searching for
life is equivalent to searching for water, since as we shall argue
in Section 6, water on a silicate body (either on a planet or
on a setellite), nearby a star or even far from a star, but near
a Jupiter-like planet, seem to be sufficient to engender life,
as tectonic activity in the silicate body is triggered off by
the vicinity of the large planet or star; this is related to the
general consensus that neither oxygen nor photosynthesis are necessary
to trigger off the simplest blueprint for a microorganism (prokaryotic)
12, 4.
The possibility of exogenous source of eartly volatiles was suggested
by John Oro in the early 1960s. Current spectroscopic analysis
of the nuclei of comets, such as the Hale-Bopp, have supported
this point of view, since it has been observed that most of the
precursors of the prebiotic molecules are present in comets.
An alternative means of probing for extraterrestrial life is by
directly detecting their radio messages, as persistently maintained
by Frank Drake. Preliminary steps to search for intelligent life
in the new planets have already been taken 1.
5.2. THE MURCHISON METEORITE: THE INVENTORY OF EARTHLY AMINO ACIDS MAY HAVE AN EXTRATERRESTRIAL COMPONENT
It has been clear for some time
now that the extraterrestrial option should not be ruled out.
Firstly, a significant illustration of the plausibility of an
extraterrestrial origin of the precursors of the biomolecules
is based on the meteorite which fell in the town of Murchison
in Australia on September 21, 1969. The laboratory of Cyril Ponnamperuma
was able to obtain a piece of it. At that time they were preparing
for the first analysis of the lunar rocks. They were able to get
the first conclusive evidence of extraterrestrial amino acids
38. The results obtained by Ponnamperuma's group have demonstrated
the universality of the formation of some organic compounds which
are essential for life today 38.
However, the above chemical evolution sketch of the origin of
life is incomplete, a fact that is illustrated, for instance,
with the question of the gases that were present in the early
Earth atmosphere, a topic which is not settled 22. Besides, carbon
dioxide must have been sufficiently abundant to have prevented
the Archean Earth from freezing under the Sun at a lower level
in the main sequence of the Hertzprung-Russell diagram (some 30%
less luminous at the time of the origin of life). This is referred
to as the 'faint young Sun paradox'. Through a greenhouse effect
there would have been the appropriate temperatures for producing
the microflora that we know must have been in existence some 3.5
Gy BP. Besides, it also remains to be clarified what was the relative
importance of the precursors of life that were brought to Earth
by comets, meteorites, and micrometeorites compared with the
inventories that were part of the Earth as it formed out of our
own planetary nebula.
5.3. THE ALLAN HILLS METEORITE: HAVE THERE BEEN PROKARYOTES IN MARS?
A second important meteorite for
exobiology has been retrieved in 1984 by a NSF mission from the
wastelands of Antartica in a field of ice called the Allan Hills.
It weighs about two kilograms. A preliminary analysis of this
meteorite (ALH84001) has been reported during the 1995 Trieste
Conference on Chemical Evolution 28; subsequently a fuller report
was made known to the public independently 29. This work has shown
the presence of an important biomarker the polycyclic aromatic
hydrocarbons (PAHs), which on Earth are abundant as fossil molecules
in ancient sedimentary rocks, and as components of petroleum.
The presence of PAHs in the ALH84001 meteorite is compatible with
the existence of past life on Mars. This result, which requires
confirmation, underlines the importance in the future of formulating
comprehensive questions (as suggested in this section), regarding
life on Mars, to include the degree of biological evolution
covering the complete range known to us, from simple
bacteria to the eukaryotes.
It should be added that since the first report of preliminary
evidence of life in the Allan Hills meteorite, some scientists
have found chemical traces in a separate meteorite that seem to
be consistent with the presence of life on Mars. They have found
organic matter in two meteorites -- the Allan Hills one and in
a second meteorite (named 79001) that crashed to Earth 600 Kyr
BP. The rock itself was sedimented some 150 million years ago.
Residues and chemicals in the rock that could only be formed
by living organisms.
The meteorite had been considered earlier in the context of whether
life existed on Mars. Experiments on parts of 79001 may be significant
as the meteorite had become sealed in a glass-like substance before
it came to Earth and was, to a certain extent, insulated from
the Earth's organic matter. The main result is that amounts of
organic material were found (up to 1,000 parts per million).
To be fair we should point out that there is still some skepticism
on the fact that these trace elements found in Martian meteorites
are sufficient evidence to say that it represents proof that there
was life on Mars.
6. Habitability of Europa by eukaryotic life
6.1. IN WHICH SOLAR SYSTEM HABITATS CAN EXTREMOPHILES SURVIVE ?
It is useful to know in which
atmospheres extremophiles may survive, as we now know of several
Solar-System planets and satellites that have atmospheres, not
all similar to our own. This consideration may help the reader
to narrow down the possible Solar System sites in which to focus
our attention in our search for 'clement' habitats. For example,
four large planetary satellites in the outer Solar System are
known to have atmospheres 17: Europa and Io (Jupiter), Titan
(Saturn) and Triton (Nepune). Mars currently has a CO2 dominated
atmosphere. The possibility of extending the biosphere deep into
the silicate crust of Mars has some implications.
This question seems pertinent to exobiology: we cannot exclude
the possibility that organisms, which have been found to inhabit
deep in the silicate crust of the Earth, may been deposited with
the original sediment, and survived over geologic time. McKay
has considered this question in some detail from the point of
view of geophysics 28. From all of these options we feel that
the most promising candidate is Europa. The reasons shall be considered
below.
6.2. FAVOURABLE SITES IN THE SOLAR SYSTEM FOR EXTREMOPHILES AND OTHER MICROORGANISMS
In the present 'Golden Age' of the search for life in the Solar System, there are two promising sites to be investigated:
o The first site is Mars, but the possibility of finding life elsewhere in the Solar System is not restricted to planetary habitats 5, 28, 29. As this possibility has been exhaustively discussed elsewhere, we shall focus attention on an attractive alternative.
o The second site is Europa, the
Jovian satellite. The existence of internal oceans in the Jovian
satellites goes back to 1980 when Gerald Feinberg and Robert
Shapiro speculated on this possibility in the specific case of
the satellite Ganymede; more recently, Shapiro has further refined
the Feinberg-Shapiro hypothesis by suggesting the presence of
hydrothermal vents at the bottom of the ocean in Europa, in analogy
with the same phenomenon on Earth 51, 52. In fact, for these reasons
Europa is a candidate for a SETE program, which we have proposed.
A large proportion of the spectroscopically detectable material
on the surface of Europa is water 36, 37. According to the results
on the 1979 Voyager fly-by, Europa showed a cracked icy crust
suggesting that underneath there might be an ocean of water. Also,
since Europa must be subject to strong Jovian tides, one would
expect the ocean to be heated by the proximity to the planet.
For these reasons it was estimated by Oro, Squyres, Reynolds and
Mills that the temperature underneath the icy crust should be
4 oC 36. The preliminary results of the photographs of Europa,
which have been retrieved from the Galileo Mission add some plausibility
to the older conjectures regarding the Europa ocean.
6.3. CAN THERMOPHILIC ARCHAEBACTERIA EVOLVE IN THE EUROPA'S OCEAN?
From the similarity of the processes
that gave rise to the solid bodies of the Solar System, we may
expect that hot springs may lie at the bottom of the ocean. The
main thesis supporting this expectation is that, as Jupiter's
primordial nebula must have contained many organic compounds,
then possibly, organisms similar to thermophilic archaebacteria
can evolve at the bottom of Europa's ocean.
The argument of Oro et al., correctly pointed out the
most important requirements for the maintenance of life in Europa;
their work is in agreement with the above list (water, an energy
source and organic compounds). However, the analogous Earth ecosystems
considered by them excluded eukaryotes. The case mentioned above
of the cyanidiophycean algae is a warning that we should keep
an open mind while discussing the possible degree of evolution
of Europan biota, or indeed of living organisms elsewhere.
We may add that up to the present the divergence into the three
domains, arising from the evolution of the 'progenote'
(the earliest ancestor of all living organisms), is not well
understood. Indeed, plate tectonics has obliterated fossils of
early organisms from the crust of the Earth, which is the only
record available to us so far, with the possible exception of
the SNC meteorites. (The initials are taken from the names of
subgroups, namely, shergottites, nakhlites and chassignites.)
These are a small group of basaltic meteorites from relatively
young (120-1300 Myr BP) lava flows on Mars.
6.4. A CASE FOR EVOLUTIONARY TRENDS IN THE EUROPAN BIOTA
Several additional factors arising
from current experience with eukaryotes may contribute to clarify
the case for not excluding these microorganisms from microorganisms
to be searched for in new Solar System environments.
o A critical step in the diversification of single-celled organisms
may have been the loss of the ability to manufacture a cell-wall
biomolecule (peptidoglycan). Without the constraint that this
biomolecule imposes on cell shape, both Archaea and Eukarya have
been able to diversify beyond the Domain Bacteria.
o In spite of the fact that eukaryotes and archaebacteria have
both lost peptidoglycan, we can nevertheless distinguish between
them, as all eukaryotes have ester lipids in their membranes,
whereas archaebacteria have ether lipids.
o Earth-bound eukaryotes are not extremophiles, but their diversification
may share a common thread with archeabacteria. Eukaryotes, in
spite of not being able to exploit fully all the extreme environments,
they may invade, to a certain extent, environments normally at
the disposal of the extremophiles.
We have remarked that the identification of primitive eukaryotes
is not straightforward; one additional difficulty is that the
simplest criterium, namely the search for a membrane-bounded set
of chromosomes, does not help to identify unambiguously eukaryotes,
as there are prokaryotic organisms that do have a membrane-bounded
nucleoid 15.
Finally, if we are granted the possibility that archaebacteria
may be present at the bottom of the Europan Ocean (Sec.6.3), then
there is really a case for testing the degree of evolution of
such biota 4:
Because they are so foreign to our everyday experience and also
far removed by catastrophes that may exterminate other ecosystems,
the hot-spring environment has been assumed to be a sort of refuge
against evolutionary pressures. If these ecosystems were true
refuges against evolution, no extinctions would be expected.
Hence no organisms that once dwelled in them would be expected
to be completely missing from contemporary hydrothermal vents.
It has also been observed by in situ submarine investigation
that hot-spring communities of animals are remarkably similar
throughout the world. This 'refuge' concept has prevailed even
amongst exobiologists that have speculated on the possible origin
of life at the bottom of the Europan putative ocean.
Previous authors have only considered that archaebacteria may
have also evolved in the bethnic regions heavily dependent on
bacterial chemosynthesis. However, scientists at the Urals branch
of the Russian Academy [26] have identified fossils from the
earliest hydrothermal-vent
community found so far, dating from the late Silurian Period,
over 400 Myr BP. This particular community has its own case of
species extinction, as the fossils have been identified and correspond
to lamp shells (inarticulate brachiopods) and snail-like organisms
(monoplacophorans). The implication of this discovery is that
since neither the above-mentioned brachiopod nor the mollusk inhabit
contemporary hydrothermal vent communities, these environments
have known their own cases of species extinction. This weakens
considerably the refuge hypothesis, namely that any environment
on Earth may serve as a refuge against the inevitable consequences
of natural selection."
We cannot maintain with certainty today that the analogous conditions
that may exist in Europa will induce the appearance of archaebacteria-like
organisms. This is purely a question of an experimental, or observational
nature. However, given the common origin of all the Solar System,
the favourable conditions in Europa may have been conducive to
the first steps in evolution, including the first appearance of
archaebacteria.
7. Conclusions
We should underline that from
the experience that we have gathered on Earth 3 we are aware of
at least two important groups of abundantly distributed biomarkers
which have been characterized from oils and sediments (the fossil
triterpanes and steranes), whose parental materials are found
almost exclusively in eukaryotes. Therefore, if the degree
of biological evolution in Mars has gone as far as eukaryogenesis
(or taken the first steps towards multicellularity) then, there
are means available for detecting this important aspect of exobiology
in future space missions (i.e., the search for the parental materials
for steranes: tetracyclic steroids).
To sum up, the presence of archaebacteria-like organisms as the
most likely biota in the Europa ocean is plausible 36, 12. We
have argued that evolution should have occurred in Europa. We
have based our work on the the fact that hydrothermal vents should
not be considered to be refuges against evolution 26 (Sec. 6.4).
This has led to our current attempt to identify parameters that
may be considered to be indicators of the degree of evolution
of putative Europan biota, both at the ice surface as well as
in the putative ocean.
These conjectures may be put to the test in the not too distant
future as we are now in the process of planning possible missions
in which these ideas may be tested. Indeed, the present work has
been stimulated by the possibility of designing for the early
part of next Century, an advanced lander mission that may melt
through the ice layer above the Europan ocean, in order to deploy
a tethered submersible 20, 56, 4, which may allow a direct test
for life and its evolutionary status.
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